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Molecular dynamics simulations of aqueous urea solutions - study of dimer stability and solution structure, and calculation of the total nitrogen radial distribution function G-N(r)

机译:尿素水溶液的分子动力学模拟-二聚体稳定性和溶液结构的研究,以及总氮径向分布函数G-N(r)的计算

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摘要

Molecular dynamics simulations have been performed in order to study the structure of two molal urea solutions in D2O. Several initial dimer configurations were considered for an adequate sampling of phase space. Eventually all of them appeared to be unstable, when system size and periodic boundary conditions are chosen properly, even after a very careful equilibration. The total nitrogen scattering function GN(r), calculated from these simulations, is in good agreement with neutron scattering experiments when both intra- and intermolecular correlations are considered and the experimental truncation ripples are introduced by a Fourier transform of GN(r) back and forth. The simple pair potential model that we used gives results in good agreement with experiments and with a much more involved potential model, recently described in the literature [J. Chem. Phys. 95, 8419 (1991)].
机译:为了研究D2O中两种摩尔尿素溶液的结构,进行了分子动力学模拟。为了充分采样相空间,考虑了几种初始二聚体配置。最终,即使在经过非常仔细的平衡之后,如果适当选择系统大小和周期性边界条件,它们似乎都不稳定。从这些模拟计算得出的总氮散射函数GN(r)与中子散射实验非常吻合,这既考虑了分子内和分子间的相关性,又通过GN(r)的傅立叶变换引入了实验性截断波纹,然后向前。我们使用的简单的对势模型可以使结果与实验和更广泛涉及的势模型很好地吻合,最近在文献中有描述[J.化学物理95,8419(1991)]。

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